PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01963.1.g00090.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 302aa    MW: 33790.5 Da    PI: 6.5034
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01963.1.g00090.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY61.91.1e-19146211359
                                   -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT......EEEEEEES--SS- CS
                          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk......vveitYegeHnhe 59 
                                   Dg++WrKYGqKe+++ ++prsYYrCt++   gC+++k v++++e +       + +++Y+g+H+++
  Zpz_sc01963.1.g00090.1.sm.mk 146 DGHQWRKYGQKEINKEKHPRSYYRCTYKqeqGCKATKTVQQQDEGTGadhaavMYTVVYHGQHTCK 211
                                   9**************************98999********99854322222227799*******97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182903.66E-20141212IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.2E-23143212IPR003657WRKY domain
SMARTSM007745.4E-29144212IPR003657WRKY domain
PROSITE profilePS5081115.376146186IPR003657WRKY domain
PfamPF031063.7E-23146211IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MKRHHNPNNN SKMSLISGQP PACYSPSRTV CDHGSAMKEI AKEQSLVTQL RAIVLPALQA  60
DERSELVAQM FQDVLDCSSK AMAELQLLHD KSDDDTLLVD DKKRVRRINP NGLNKEDVIK  120
PHQKHNSRSR RFADSVPLET PIPHYDGHQW RKYGQKEINK EKHPRSYYRC TYKQEQGCKA  180
TKTVQQQDEG TGADHAAVMY TVVYHGQHTC KQGNSCSDSG ADGFEAKIAV PSGSDDSRSS  240
ISKNCLECPC DQQSSRDGSN KLINESADLN AENNMYEAFD MTASAFLELD SWDLDALLRS  300
DA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004977389.14e-99PREDICTED: probable WRKY transcription factor 63
TrEMBLK3Y9724e-99K3Y972_SETIT; Uncharacterized protein
STRINGSi010764m1e-98(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32583079
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.22e-17WRKY family protein